Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVY-PDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAK-FPPSLRNMYKELADDIG-CVRQTPHLQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
3A7N Chain:A ((39-235))
------------------MGQFLRAEIAAGRRYLPAGSNVLRAFTF-PFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDW-----
General information:
TITO was launched using:
RESULT:
Template:
3A7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112498 for 1535 contacts (-73.3/contact) +
2D Compatibility (PS) -20909 + (NN) -7821 + (LL) 1976
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -162002.0 ( -105.54 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3A7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A7N-query.scw
PDB file :
Tito_Scwrl_3A7N.pdb
: