Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
1S5Z Chain:A ((9-155))
-ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKP-NPNLYE
General information:
TITO was launched using:
RESULT:
Template:
1S5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76765 for 1117 contacts (-68.7/contact) +
2D Compatibility (PS) -15776 + (NN) -5189 + (LL) 308
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -116022.0 ( -103.87 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1S5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S5Z-query.scw
PDB file :
Tito_Scwrl_1S5Z.pdb
: