Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4JLD Chain:A ((1-202))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHG---NVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPP-------PGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVI---
General information:
TITO was launched using:
RESULT:
Template:
4JLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69761 for 1566 contacts (-44.5/contact) +
2D Compatibility (PS) -21660 + (NN) -11392 + (LL) 928
1D Compatibility (HY) -20400 + (ID) 4450
Total energy: -126735.0 ( -80.93 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4JLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JLD-query.scw
PDB file :
Tito_Scwrl_4JLD.pdb
: