Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRALETIATLREYRKSLKESVGFVPTMGALHRGHQSLIERSLK-ENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTL--VLVAARVGKTRLLDNLWV
3COY Chain:B ((35-286))--------------------VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ--------AYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQ---PGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDAAPGVAVDYLELRDIGLGPM----PLNGSGRLLVAARLGTTRLLDNIAI


General information:
TITO was launched using:
RESULT:

Template: 3COY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130547 for 1921 contacts (-68.0/contact) +
2D Compatibility (PS) -25922 + (NN) -6873 + (LL) 3100
1D Compatibility (HY) -18800 + (ID) 5150
Total energy: -184192.0 ( -95.88 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3COY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3COY-query.scw
PDB file : Tito_Scwrl_3COY.pdb: