Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTTINHSVELVGIGLHKGVPVKLVLEPLEENQGIVFYRSDLGVKLPLKPENIVDTKMATVLGKDNARISTIEHLLSAVHAYGIDNLKISVDNEEIPIMDGSALTYCMLLDEAGI---KELDAPKKVMEIKQAVEVREGDKFVKIEPDSQLSLNFTIDFNHPVIAKQAHHFVFSKTAYKEQVAKARTFGFLQEVNYLRSIGLAKGGSLNNCIVLDENSILNKEGLRCEKEFVCHKILDAMGDLMVLGMPVMGKYTSFSGSHKLNSMLVKAILADAKNYEVLIASDPAKEFALQKAFA |
| 2GO4 Chain:A ((4-263)) | --EKTVKEKLSFEGVGIHTGEYSKLIIHPEKEGTGIRFFKN--GVYIPARHEFVVHTNHSTDLGFKGQRIKTVEHILSVLHLLEITNVTIEVIGNEIPILDGSGWEFYEAIRKNILNQNREID----YFVVEEPIIVEDEGRLIKAEPSDTLEVTYEGEFKN-FLGRQKFTFV---EGNEEEIVLARTFAFDWEIEHIKKVGLGKGGSLKNTLVLGKDKVYNPEGLRYENEPVRHKVFDLIGDLYLLGSPVKGKFYSFRGGHSLNVKLVKELAKKQ---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170276 for 2247 contacts (-75.8/contact) +
2D Compatibility (PS) -27450 + (NN) -4748 + (LL) 2456
1D Compatibility (HY) -23600 + (ID) 4850
Total energy: -228468.0 ( -101.68 by residue)
QMean score : 0.467
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