Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSILTDFEPKFLSSDDLLNLYAEYCNGHYCDFKYKQRRLSDGNIQSHLYFKKDHFIHDYNGIETFKRFIAVKAYDVDNITSLALSNLLC--EKFNLDILLTIEAMDKERALFFIRERKKRSKDISYQNIEYLEQMVSTDRAQIQKVSLSIMV-FANSKKELDKKSIIVYNTLKKEGFSAVLESINMRPIFFSFFPERNFLNSRLRPQTSQNIASLIMFEKYQEGFKENSWG-DCPVSVFKNQNGSAHFFNFQAKQGKDKNDNVVGHTMIIGSTGSGKSTFISFLIANLLTKYDMSVVALDRMNGLEIMTDFFEGQYNTANTDGGFYINPFSLKDSEENRQFLANWIKFMLNIDSDNQQDNKASQSIDKVIRDTYNYMGDQKNQINLLEIAKNLGSSEQDFNEILKSQGEKIYFKNFQDCLDFSNSPLSVINMDAFANDKKLMGLIAMYLFHKLFFEAKEHNKPFFYSLMKLKTTLCIL |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLFPCREAAIETLGELIGD------------SSETYPSAIYLFG----HSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKV------------DNMLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPVLLRLQELT------NLNLCVILLSQLPFEKFYN-----KTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVL-----DGTSRLWRHIAGPLRSALTQIYMRIESLELP-------YYAKFLLIAAFLASHNAAKQDKRLFSTTLGPKSFS-------IDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNL---LSFVSGEQNIMEGSA-----RLQCTIGLEFVLQIGKVVGFNVRQYLCD----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95697 for 2912 contacts (-32.9/contact) +
2D Compatibility (PS) -41893 + (NN) -10346 + (LL) 5708
1D Compatibility (HY) -20800 + (ID) 3450
Total energy: -166478.0 ( -57.17 by residue)
QMean score : 0.168
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