Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQENQTIPFKCPKCQEPINVSEALYKQIESENQSRFLAQQKAFEKEVNEKRAQYQSYFKNLEQKEEALKERAKEQQAQFDEAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKLNEKLELEREKIEKALHEKNELKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDSVEEIKKGQRGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKGLSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNAIIEGFEQLRADLESEKRAMARIWKSREKQIEKVFESTINMYGSIKGIAGNAIGQVKALELGYDEGDLEN |
1XAW Chain:A ((416-522)) | -------------------------------------WIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSVLDEINKELSRLDKELDDYREESEEYMAAADEYNRLKQVKG------SADYKSKKNHCKQLKSKLSHIKKMVGDYDRQKT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43649 for 612 contacts (71.3/contact) +
2D Compatibility (PS) -12267 + (NN) -9480 + (LL) 26328
1D Compatibility (HY) 0 + (ID) 600
Total energy: 47630.0 ( 77.83 by residue)
QMean score : 0.547
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