Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQILPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLH-----------------KKISNKQESPKNTPSYKIRKALS--VLLFAPVVAGLMMLFFFYF-IAPEDFFMYLKNPSDHPIAMGFWLFSALVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGVLYDNQGRLFPLPPKKRSAENE---CVNCLHCVQVCPTHIDIRKGLQLECIN-------CLECVDACTITM-----------AKYNRPSLIQWSSTNAINTRQKVRLVRLKTIAYMGVIAVVVALLIITSFKKERMLLDINRNSDLYEIRSSGYVDNDYVFLFHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLKGNATEYKHAKDALIPITIQAYSVDDKNITIERESVFIVPSED |
| 3WO4 Chain:B ((1-301)) | -------------------------------------------------------------------------------------------GPESCTSRPHITVVEGEPFYLKHCSCSLAHEIETTTKSWYKSSGSQEHVELNPRSSSRIALHDCVLEFWPVELNDTGSYFFQMKNYTQKWKLNVIRRNKHS------CFTERQVTSKIVEVKKFFQIT-CE----NSYYQTLVNSTSLYKNCKKLLLENNKN-----PTIKKNAEFEDQGYYSCVHFLHHNGKLFNITKTFNITIVEDRSNIVPVLLGPKLNHVAVELGKNVRLNCSALLNEEDVIYWMFGEENGSDPNIHEEKEMRIMTPEGKWHASKVLRIENIGESNLNV-----LYNCTVASTGGTDTKSFILVRKAD-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105221 for 1619 contacts (-65.0/contact) +
2D Compatibility (PS) -27872 + (NN) 702 + (LL) 17220
1D Compatibility (HY) -6000 + (ID) 2750
Total energy: -123921.0 ( -76.54 by residue)
QMean score : 0.143
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