Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDS-AV-PRFPLSELEAVLADEELYLAFSEWFSEAFLDVLKK----------YPNDRFAINIAPQQLFYIETLHWLD----KLKSESHRITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVMSYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQGYLVNKPFPV
2R6O Chain:A ((35-268))
LERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLVMPSAFIPAAED----TGLIVALSDWVLEACCTQLRAWQQQGRAADDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVML--------VMT---DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAH-PSETQIVTTILALARGLGMEVVAEGIETAQQYAFLRDRGCEFGQGNLMSTPQA-
General information:
TITO was launched using:
RESULT:
Template:
2R6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132365 for 1709 contacts (-77.5/contact) +
2D Compatibility (PS) -23511 + (NN) -13910 + (LL) 892
1D Compatibility (HY) -6800 + (ID) 2000
Total energy: -177694.0 ( -103.98 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2R6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R6O-query.scw
PDB file :
Tito_Scwrl_2R6O.pdb
: