Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIRAANELKLTVPEVADRFIGAYFDDVDQLNVAKASVNPRVTE--NMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGK---------LSGQELSELQHGA----------RVEYNERKQ-----DEL---D-FTLWKAAK-PG-EIFWES---PFGNGRPGW--HIECS---ALAKKYL------G------DTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLN-IDGEKMSKSLGNFITLHDVLKDNDPNVIRFFMLSV-HYRKPITLNDAILEDAK--NGLERLMIAYQNIDHRIQTDDGEYVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVS------INVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRFRRG |
| 2D5B Chain:A ((3-475)) | ---------------------KVFYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYDD-FIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEGLYCVSCERFYTEKELVEGLCPIHGRPVERRKEGNYFFRMEKYRPWLQ-EYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGIPLPWDENHVTFVWFDALLNYVSALDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLKA-AGIPMYRHLNVGGFLLGPDGRKMSKTLGNVVDPFALLEKYGRDALRYYLLREIPYGQDTPVSEEALRTRYEADLADDLGNLVQRTRAMLFRFAEGRIPEPVAGEELAEGTGLAGRLRPLV-RELKFHVALEEAMAYVKALNRYINEKKPWELFKKEPEEARAVLYRVVEGLRIASILLTPA--MPDKMAELRRALGLKEEVRL--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75876 for 3192 contacts (-23.8/contact) +
2D Compatibility (PS) -43762 + (NN) -12567 + (LL) 4512
1D Compatibility (HY) -8400 + (ID) 3800
Total energy: -139893.0 ( -43.83 by residue)
QMean score : 0.282
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