Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKELLTFPKDFWWGSAWSAEQAEGRG-DTGKAKTVWEHWFETEPNRFYEGVGSEITTDHFNRYKEDVQWMKKTGQNSFRISISWARMFPDDGVGEVNQKAIAFYRDLLTEMNENGVKPFANLYHFDMPVALQDAGGWESREVVDAYVHFADTCFKEFGDLVYHWFTFNEPLGPILGGYLEGFHYPNQIDFKRGTQAGFNTILAHTLAIKAFKKINLSSKIGVILNLSPTYPRSQNEYDLEAAEICDAFYTRS-FLDPMVKGTFPEKLVEIMREYDQMPEYTEEDLTIIKENTAQILGLNYYEPRRVKARLTAINEKSPFLPDWFFEPHNMPGKRMNIYRGWEIYERGIYDLCIDIRDNYGNIESFISENGMGVANEERFLNEEGQIQDDYRIQFVKDHLAYVHQAIAEGCDIKGYHLWTFIDCWSWINAYKNRYGLVSLDVETGKRTMKKSGEFYKKMSDMNGFEYETSKLVGTKREETTNG |
2J75 Chain:A ((28-467)) | ------FPEGFLWGVATASYQIEGSPLADGAGMSIW-HTFSHTPGNVKNGDTGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPE-GTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPAS---EDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREY--LPENYKDDMSEIQEKI-DFVGLNYYSGHLVKFD--APAKVS-------FVERDLPKTAM----GWEIVPEGIYWILKKVKEEYNPPEVYITENG---AAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEGYSKRFGIVYVDYSTQKRIVKDSGYWYSNVVKNNGLE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J75.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145547 for 3895 contacts (-37.4/contact) +
2D Compatibility (PS) -45443 + (NN) -13125 + (LL) 2908
1D Compatibility (HY) -35200 + (ID) 8050
Total energy: -244457.0 ( -62.76 by residue)
QMean score : 0.498
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