Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGIT--L--GNWDKH----VLKMLESIKENADFYKNTVSADA-SI-LS---FCFSKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
3LWJ Chain:A ((9-189))
--QNKERRQKILTCSLDLFIEKGYYNTSIRDIIALSEVGTGTFYNYFVDKEDILKNLLEDFAKQIISSISEYYLVEKDLYERFIETKRLTMEVFAQNETLSEIYSRVAGSSAPIDQCLKQFEDRLLEFYSRNIEYGIKKGVFKNVPVSPIAHSILAIEKFSLYKWVVLK-AITKEEMIEMVLSF---------------
General information:
TITO was launched using:
RESULT:
Template:
3LWJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94075 for 1130 contacts (-83.3/contact) +
2D Compatibility (PS) -17191 + (NN) -4802 + (LL) 1540
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -119478.0 ( -105.73 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3LWJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWJ-query.scw
PDB file :
Tito_Scwrl_3LWJ.pdb
: