Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------LDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK |
| 4IVN Chain:A ((6-278)) | NLLVRLRSNMEPFSKKLRVVADYILENAHDVQFQTITDLARNTQTSEATVVRLCRDMGYKGYSDFRMALAVDLSQTGDICDVSAQSAVDSLQDTAKLIDRKSLARIVERVHQA-EFIGCIGVGASSIVGRYLAYRLIRIGKKAIMFEDTHLAAMSASRSSQGDLWFAVSSSGSTKEVIHAAGLAYKRDIPVVSLTNINHSPLSSLSTEMLVAARPEGP-----LTGGAFASKVGALLLVDVLVNSLLESYPEYKDSVQETAEVVIPLMAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127210 for 1559 contacts (-81.6/contact) +
2D Compatibility (PS) -20761 + (NN) -8300 + (LL) 96
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -163075.0 ( -104.60 by residue)
QMean score : 0.472
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