Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKP-EKFGAEHLESLKTIASA----------------FTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIET---MPNDSYIF--CIIDL---GNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSILEKFCEALKDSFKSVHP---ISPEIVN------IETNPALLRVTSPNDMMALVS-----------VDIKSEFWISTMRIGVP---------------FFSVEEIMNKLENVVEYTFDK--------RRNFDAE----------VEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMR--HTGRTEQER- |
| 3HJH Chain:A ((5-450)) | YRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMN----LADWETL-PYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFD-VDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26770 for 2094 contacts (-12.8/contact) +
2D Compatibility (PS) -34517 + (NN) -7257 + (LL) 332
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -76262.0 ( -36.42 by residue)
QMean score : 0.236
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