Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQT-HKDINILQKDIFDLT--LSDLSDQNVVVDAYGVSPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLRSHQAEFSWTYISPSAMFEPGERTGDYQ-I-GKDH--LLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK
2JL1 Chain:A ((1-200))
FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD-NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--S---------I-IP---LA--HVHLATEYAIRT--TNIPYTFLRNALYTDFFVN-EGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVS-
General information:
TITO was launched using:
RESULT:
Template:
2JL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70532 for 1472 contacts (-47.9/contact) +
2D Compatibility (PS) -20922 + (NN) -11085 + (LL) 1196
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -104993.0 ( -71.33 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2JL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JL1-query.scw
PDB file :
Tito_Scwrl_2JL1.pdb
: