Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MVVKQKADYAALKEELIAYAYEIGIQKIGFTTADPFL-FLKERLLEAEALDLFTGFEHPVIEERVYPELIFKEPQSIIAIALAYPSKLKEAPVSKKGARRGVF---ARASWGIDYHTVLREKLALLETFLIERLPDVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGS-WVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGE-------------GKMN----PKICLSYLTQTKDFLDEKYREVLHNRLYGCD--------TCQVVCPYNRGHDFHFHEEMEPDPELVRPELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGG----RDAEEAVERALQTEQDVQVLQELTAIPN |
| 1NY5 Chain:A ((1-384)) | MNVLVI---EDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVN---GLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKKIS-CAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALN--VASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR--NIKELVKEGKFREDLYYRLGV-IEIEIPPLRER----------KEDIIPLANHFLKKFSRK----------YAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86510 for 2589 contacts (-33.4/contact) +
2D Compatibility (PS) -37883 + (NN) -17299 + (LL) 1336
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -152956.0 ( -59.08 by residue)
QMean score : 0.262
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