Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGHGS----LIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAG--HIELQYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI |
3GFH Chain:A ((2-215)) | --------PALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADS-DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEA-TYGIDAALKSADVQLATYVPP---PSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNP------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110156 for 1724 contacts (-63.9/contact) +
2D Compatibility (PS) -22250 + (NN) -8899 + (LL) 384
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -149621.0 ( -86.79 by residue)
QMean score : 0.426
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