Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE
4QIF Chain:F ((11-98))
---QEALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGHGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPK---
General information:
TITO was launched using:
RESULT:
Template:
4QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37012 for 694 contacts (-53.3/contact) +
2D Compatibility (PS) -9655 + (NN) -3484 + (LL) 492
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -62459.0 ( -90.00 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIF-query.scw
PDB file :
Tito_Scwrl_4QIF.pdb
: