Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIF----QELGMNAEYNSVLIEEDAFETEIK-KLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGL--EASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 4FR5 Chain:A ((3-247)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILL---PLESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLKQ----KNYQNALILGAGGSAKALACELKKQ-GLQVSVLNRSSRGLDFFQRLGCD----CFMEPPK--SAFDLIINATSASLHNELPLNKEVLK-GYFKEGKLAYDLA-SGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45647 for 2088 contacts (-21.9/contact) +
2D Compatibility (PS) -25159 + (NN) -6346 + (LL) 3008
1D Compatibility (HY) -19200 + (ID) 4050
Total energy: -97394.0 ( -46.64 by residue)
QMean score : 0.411
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