Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMKKMDADTLTAILAFQRLSGTGKSLLEGAAKDAEAGRYSIIAINPVHEIKVYQHDYYIDGTHQVVADPLKEIELFIEKAREDELELPLDSGAIGYVGYDVIALYEDLGEIPVETRDIPDIRFYVYESFVIMDHQAEELILVQDNCYSG----------RSEADLDKALESMLTELTT-PKKDEHKAVHVPKMSYKSNYTKDEYMGLVKKAKTYIQEGDFFQIVLSQRLEADFT--VKPFDYYRKLRLLNPSPYLYFIDF-GDTVLIGSSPESLIKTKGRTVITNPIAGTRRRGATKQEDELLASELLSDEKELAEHRMLVDLGRNDIGKIAETGSVHVPVYLTIERYRFLMHLVSVVEGTLKTGLTAIDALRSTLPAGTVSGAPKIRAMERIYEWENVKRGPYAGAVGYLTKNGDSDFALSIRTMVLHNGKAYVQAGAGIVYDSDPESEYLETLQKAKALLEVGE |
| 2EUA Chain:A ((2-429)) | ------------------QSLTTALENLLRHLSQEIPATPGIRVIDIPFPL-----------------KDAFDALSWLASQQTYPQFYWQQRNGDEEAVVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADTQTLDVLPP---QVLRLRKVQHLRRCIWTSLNKA-DDVICLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLS-LQQSEFCVSLRSAKISGNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98816 for 3446 contacts (-28.7/contact) +
2D Compatibility (PS) -44878 + (NN) -15811 + (LL) 4068
1D Compatibility (HY) -11600 + (ID) 4750
Total energy: -171787.0 ( -49.85 by residue)
QMean score : 0.364
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