Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNETVTIVPGEKHIFWTDIKSYMQEDEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGNIGIAIKNFSN---------------------------EPVSIEAGERVAQGVFQKYLVADTDI-----VANESRVGGVGSTGR
3ZF6 Chain:A ((45-207))
--------------KLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIE--TGKIAAGYH------GNLGINIKNDHEDDKMQTIFLRNICNEKIFEKERHLYKLGSYRIEKGERIAQLVIVPIWTPELKQVEEFESVSERGEKGFGSCGV
General information:
TITO was launched using:
RESULT:
Template:
3ZF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55757 for 808 contacts (-69.0/contact) +
2D Compatibility (PS) -14221 + (NN) -282 + (LL) 392
1D Compatibility (HY) -5200 + (ID) 2400
Total energy: -77468.0 ( -95.88 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3ZF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZF6-query.scw
PDB file :
Tito_Scwrl_3ZF6.pdb
: