Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSGHQFKRFTMIIIVLIIAIAAAVFFFWQVDAEEQAPKVSKTELIESNKVWINNQMQIPIQDKIILSIPATNTNTTIASNGDLILET---TNEEILKELASSDNRYKDIKAYRLRIEAKKVSEYITNTKYRYPTTTIQKKFANYEITSGERSVQTEKTPVQI---EETTNNDIKVSLNTSYSSDDAEVAADIFNSQIPEETTITD-----------NTKNLITNKNVTIYPKTFVYDFTLQKNTMLVFKEQEEAVIKEPIGIEYIIK- |
| 4H4K Chain:A ((4-321)) | -VTFTPYDVLIPLPQTVAGAIRTLLF------YEEPEFTLVGIAIGTEKGRIYPLPFNIIKSEKFYKVVNPGRFLGKLILPPKGKYKSGYVTESILEKYLKGELKEVEENKVIR--ILRIEKIYAWIEDPGCGIKDILSSY-EFLTLGSRVAFVEVDDKTPDIFNRELGSTKKALFYFSTPTIGKVGEIVQELEKRLNAKIDDYLLVSSRPTAISGWDMHEKKPKGTKFAIPPGSVLFVEFKEEVEVPPYIKLGKLKKLGYGLALGGIW |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4H4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 13666 for 1838 contacts (7.4/contact) +
2D Compatibility (PS) -25178 + (NN) -4100 + (LL) 1272
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -19490.0 ( -10.60 by residue)
QMean score : 0.163
|
|
|