Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLP---AYKDYWNYAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMTFEDA---ILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDA-GFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELELNL
4B5J Chain:A ((2-253))LKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKN--EGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP-GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVE---


General information:
TITO was launched using:
RESULT:

Template: 4B5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118585 for 2070 contacts (-57.3/contact) +
2D Compatibility (PS) -26514 + (NN) -8121 + (LL) 296
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -178274.0 ( -86.12 by residue)
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_4B5J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B5J-query.scw
PDB file : Tito_Scwrl_4B5J.pdb: