Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTIGCDHGGRRLKDAIVKHLREKDI--EVVDIG-TYTDESVDFPSYAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSNILCLGERVIGEGLALLLVDTWLEASF-AGDRHKRRLDKITELERK
3SGW Chain:A ((30-179))
LRLAIACDDAGVSYKEALKAHLSDNPLVSSITDVGVTSTTDKTAYPHVAIQAAQLIKDGKVDRALMICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRVIGIELAKRLAGEWLTYRFDQKSASAQKVQAISDYEKK
General information:
TITO was launched using:
RESULT:
Template:
3SGW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103369 for 1173 contacts (-88.1/contact) +
2D Compatibility (PS) -16297 + (NN) -10134 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -142400.0 ( -121.40 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_3SGW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SGW-query.scw
PDB file :
Tito_Scwrl_3SGW.pdb
: