Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTCSGSGAKPGTSPVTCQKCHGSGVINVDTQTPLGTMRRQVTCDVCQGSGQEIKEKCPTCHGTGHEKKTHKVSVKIPAGVETGQQIRLTGQGEAGFNGGPYGDLFVIINVLPSQQFERNGSTIYYTLKISFVQAALGDTIDIPTVHGA-VEMSIPAGTQTGKTFRLRGKGAPKLRG-GGQGDQHVTVNIVTPTKLNDAQKEALHAFAEASGDKMVHPKKKGFFDKVKDALDVD |
1C3G Chain:A ((180-349)) | ----------------------------------------------------------------------------------------------------------------------ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHG----------------------------------------------------------------ASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44686 for 1092 contacts (-40.9/contact) +
2D Compatibility (PS) -18469 + (NN) -6796 + (LL) 5704
1D Compatibility (HY) -10000 + (ID) 2150
Total energy: -76397.0 ( -69.96 by residue)
QMean score : 0.477
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