Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSKENMKAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWN-DRENIIKWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWDE------LKFQAK---------EMYG--LPAFPLL---YEVSTISK-----IRAGF-----SYGQASSVEQLKKNNLPALFIHGDKDNFVPTSMVYDNYKATAGKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK |
| 3OM8 Chain:A ((14-266)) | ------------------------------------------------------------------------GASLAYRLDGAA--EKPLLALSNSIGTTLHMWDAQLPALT-RHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLD----ALEVRRAHFLGLSLGGIVGQWLAL-HAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTLP-AVHLSN-VEFPQAFEGAVLSFLGA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59808 for 1853 contacts (-32.3/contact) +
2D Compatibility (PS) -23492 + (NN) -9381 + (LL) 7112
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -90719.0 ( -48.96 by residue)
QMean score : 0.363
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