Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIQAAGIEFDLAFTSVLKRAIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVLPPDMAKDDEH--SAHTDRRYASLDDSV--IPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFEFDEKLNLVSEY-YLGK
2H52 Chain:A ((5-236))
--KLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGD
General information:
TITO was launched using:
RESULT:
Template:
2H52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68573 for 1877 contacts (-36.5/contact) +
2D Compatibility (PS) -24453 + (NN) -4383 + (LL) 400
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -121609.0 ( -64.79 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2H52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H52-query.scw
PDB file :
Tito_Scwrl_2H52.pdb
: