Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNKKKLHGFFNFVRWLLVVLLIIVGLALVFNKPIRNAFIAHQSNHYQISRVSKKTIEKNKKSKTSYDFSSVKSISTESILSAQTKSHNLPVIGGIAIPDVEINLPIFKGLGNTEL-SYGAGTMKENQIMGGQNNYALASHHVFGLTGSSKMLFSPLEHAKKGMKVYLTDKSKVYTYTITEISKVTPEHVEVIDDTPGKS-QLTLVTCTDPEATERIIVHAELEKTGEFSTADESILKAFSKKYNQINL |
1IJA Chain:A ((1-148)) | ------------------------------------------------------------------------------MQAKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENE-SLDDQNISIAGHTF---IDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTLITCDDYNEKTGVWEKRKIFVATEVK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48488 for 1068 contacts (-45.4/contact) +
2D Compatibility (PS) -15572 + (NN) -5386 + (LL) 8112
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -69084.0 ( -64.69 by residue)
QMean score : 0.365
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