Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQVFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPTGEDRFAIISGQKKMFDFEEGYFYPAKESIDFYHHYKEDLALLAEMGFKTYRMSIAWTRIFPKGDELYPNEAGLRFYENIFKECRKYGIEPLVTITHFDCPIYLIKHYGGWRSRKMIGFYERLVRALFTRFKGLVKYWLTFNEINMI--------LHAPFMGAGLYFEDGENQEQIKYQAAHHELVASAIAVKIAHEVDPNNQIGCMLAAGQYYPNTCHPQDYWAS--MQKNRENYFFIDVQTRGKYP----NYAKKYFEHLGISIQMTAEDLALLRDYTVDFISFSYYSSRVASGNPTVSEQVQENIFASLKNPYLKSSEWGWQIDPLGLRITLNAIWDRYQKP-MFIVENGLGAVDIPDENGYVEDDYRIDYLRQHIAAMRDAIYVDGVNLIGYTTWGCIDLVSAGTGEMEKRYGFIYVDRNNKGEGTLKRYKKKSFYWYKKVIASNGSQIE |
| 2JAL Chain:B ((28-465)) | -----FPEGFLWGVATASYQIEGSPLADGAGMSIWHT-------FSHTPGNVKNGD-------TGDVACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEGTGRV-NQKGLDFYNRIIDTLLEKGITPFVTIYHWDLP-FALQLKGGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAP----------GMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLP------ENYKDDMSEIQE-KIDFVGLNYYSGHLVKFDPDAPAKV------SFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQ-EGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYVDYS-----TQKRIVKDSGYWYSNVVKNNGLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220768 for 3706 contacts (-59.6/contact) +
2D Compatibility (PS) -44386 + (NN) -10800 + (LL) 3228
1D Compatibility (HY) -31200 + (ID) 7550
Total energy: -311476.0 ( -84.05 by residue)
QMean score : 0.484
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