Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAR---EASPYLTYLGAFSFQAQRNG-TLVAPPLTNLRSITESQNTTLMMIITNL--ENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRPQDREAYNQFLREARDLFHREGLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLM-TYEWG---YSGGP------PQAVSPIGPVRDVIEYALTEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTD-----------AENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKL-GLSFPQNWLLLSDQFNVVKKTFR |
| 4Q6T Chain:A ((4-340)) | -------------------------------------------------------------------------------------------------APFVLAYTDGQVEASYSNLQAFHRNLSAVGLGSTYGLTVTGKLRQDGMN---ETTQNIIRFAKSQSLPLYPTVSDYNEDIGAFDPAISHSILNDRALSAGTVKQLVKLAKEGGFAGINLDFEKVEPRNRAAFCAFVKTLGNALHASNKKLIISIPPKLSDTEP-EYLQGYDYKALGAAVDYFQ-VMTYDQVGPGWSSGGFHNEAWPGPESGFDWQQALLSYAVSRVPASKVLAGLPTYGQDYSIG--------NRVHWSAYQEIIAEHRAAIHRDAASATPYATWGPVKSFVDGVEWTPERAQPVLWYDDAASIKTKTALVTRLGLGGTSVW-AMGYENAGFWAALQSGLK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120978 for 2665 contacts (-45.4/contact) +
2D Compatibility (PS) -32383 + (NN) -4611 + (LL) 8020
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: -167452.0 ( -62.83 by residue)
QMean score : 0.487
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