Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFP----LAIGVLKGALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
4RHT Chain:A ((21-198))
----DIKSVLLTAEQIQARIAELGEQIGNDYR----GQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG------GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPR----
General information:
TITO was launched using:
RESULT:
Template:
4RHT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138990 for 1225 contacts (-113.5/contact) +
2D Compatibility (PS) -17809 + (NN) -7343 + (LL) 932
1D Compatibility (HY) -21200 + (ID) 4100
Total energy: -188510.0 ( -153.89 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_4RHT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHT-query.scw
PDB file :
Tito_Scwrl_4RHT.pdb
: