Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLIEREKTVYYKEKPDPSSLGFGQYFTDYMFVMDYEEGIGWHHPRIAPYAPLTLDPSSSVFHYGQAVFEGLKAYRTDDGRVLLFRPDQNIKRLNRSCERMSMPPLDEELVLEALTQLVELEKDWVPK-EKGTSLYIRPFVIATEPSLGVKASRSYTFMIVLSPVGSYYGDDQLKPVRIYVEDEYVRAVNGGVGFAKTAGNYAASLQAQRKANELGYDQVLWLDAIEKKYVEEVGSMNIFFVI-NGEAVTPALSGSILSGVTRASAIELI-RSWGIPVREERISIDEVYAASARGELTEVFGTGTAAVVTPVGELNIHGKT--VIVGDGQIGDLSKKLYETITDIQLGKVKGPFNWTVEV
3UZO Chain:B ((25-358))-----------------DWSTLGFSYIRTDLRYLAHWKDG-EWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYF-KGGLTPTN-FITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKFVTPQSPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDEL------GKFSEAGACGTAAVITPIGGIQ-HGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV


General information:
TITO was launched using:
RESULT:

Template: 3UZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1852 -186166 -100.52 -565.85
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -100.52
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_3UZO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UZO-query.scw
PDB file : Tito_Scwrl_3UZO.pdb: