Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIAIAAITATSILALSACSSGDKEVIAKTDAGDVTKGELYTNMKKTAGASVLTQLVQEKVLDKKYKVSDKEIDNKLKEYKTQLGDQYTALEKQYGKDYLKEQVKYELLTQKAAKDNIKVTDADIKEYWEGLKGKIRASHILVADKKTAEEVEKKLKKGEKFEDLAKEYSTDSSASKGGDLGWF-AKEGQMDETFSKAAFKLKTGEVS------DPVKTQYGYHIIKKTEERGKYDDMKKELKSEVLEQKLNDNAAVQEAVQKVMKKADIEVKDKDLKDTFNTSSTSNSTSSSSSNSK
3UI4 Chain:A ((6-100))--------------------------------------------------------------------------------------------------------------------------------------NAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDK-ARQGGDLGWMTR--GSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGR-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3UI4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 422 -36573 -86.66 -415.60
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -86.66
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.680

(partial model without unconserved sides chains):
PDB file : Tito_3UI4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UI4-query.scw
PDB file : Tito_Scwrl_3UI4.pdb: