Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQTIRVELTSTKKPKPDPNQLSFGRVFTDHMFVMDYAADKGWYDPRIIPYQPLSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSNDRLCIPQIDEEQVLEGLKQLVAIDKDWIPN-AEGTSLYIRPFIIATEPFLGVAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAGNYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGE---IVTPMLNGSILEGITRNSVIALLKH-WGLQVSERKIAIDEVIQAHKDGILEEAFGTGTAAVISPVGELIWQDE-TLSINNGETGEIAKKLYDTITGIQKGAVADEFGWTTEVAALTESK
3UZO Chain:B ((24-358))-----------------IDWSTLGFSYIRTDLRYLAHWK-DGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNF-ITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAAN-FFAITQDGQKFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDEL------GKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV-------


General information:
TITO was launched using:
RESULT:

Template: 3UZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1826 -78216 -42.83 -237.74
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -42.83
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3UZO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UZO-query.scw
PDB file : Tito_Scwrl_3UZO.pdb: