Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVVRSIGKKMQRISGPNALAVKGRPTQVYGHTHVRLDCRFMADSEFTAPEVTQLAEGLHRALSKLISMLRRGDPNGAAAGDLTLAQLSILVTLLDQ--GPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLAN-RRAALAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPARKRA |
3ZMD Chain:A ((27-174)) | ------------------------------------------------TRWLTDTEQCAWRTHLEVNRLLTHQLEKDLQPFGLTMNDYEILVNLSESEGDRMRMSDLATATMQSKSRLSHQITRMENANLVRRENCESDRRGLFAVLTEHGLETMRKVAPHHVASVRRHFIDLLAPEDLTELDKALKPIAEHLRGQ--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46159 for 886 contacts (-52.1/contact) +
2D Compatibility (PS) -15788 + (NN) -7678 + (LL) 3240
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -73685.0 ( -83.17 by residue)
QMean score : 0.437
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