Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPHSWTPTSVMTPPLVVAAFRPVGHYRLATDRAGGPCSPPATGAKLTSSVASRPTVGTKPQWWHTLVMSMSLTAGRGPGRPPAAKADETRKRILHAARQVFSERGYDGATFQEIAVRADLTRPAINHYFANKRVLYQEVVEQTHELVIVAGIERARREPTLMGRLAVVVDFAMEADAQYPASTAFLATTVLESQRHPELSRTENDAVRATREFLVWAVNDAIERGELAADVDVSSLAETLLVVLCGVGFYIGFVG--------SYQRMATITDSFQQLLAGTLWRPPT |
3F0C Chain:A ((10-205)) | --------------------------------------------------------------------------------------DGKLELIINAAQKRFAHYGLCKTTMNEIASDVGMGKASLYYYFPDKETLFEAVIKKEQNVFFDEMDKILNSGIDATALLKKYVKLRSLHFRHLLNLSKLRSDF-----TKPVFAKAFESFKQKEVEIVAGIIQYGITTKEFKRG-NKHENAEFLVHLLLGVRMVKLKYKEINDFDESDYEDLDKNMCKVAGMFLKEIQT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105274 for 1335 contacts (-78.9/contact) +
2D Compatibility (PS) -19811 + (NN) -8338 + (LL) 3984
1D Compatibility (HY) -9600 + (ID) 1400
Total energy: -140439.0 ( -105.20 by residue)
QMean score : 0.469
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