Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MACERLGGQSGAADVDAAAPAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRR-RVGMLFQRPNPFPM-SIMDNV-LAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSD-SPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSL--ADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKHAETARYVAGLSGDVKDAKRGN |
| 1L2T Chain:A ((21-226)) | ------------------------------------LKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTND---LDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEER---RKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI-NVARFGERIIYLKDGEVERE--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86722 for 1559 contacts (-55.6/contact) +
2D Compatibility (PS) -21773 + (NN) -10016 + (LL) 4084
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -130177.0 ( -83.50 by residue)
QMean score : 0.478
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