Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRRKVRRLTLAVSALVALFPAVAGCSDSGDNKPGATIPSTPANAEGRHGPFFPQCGGVSDQTVTELTRVTGLVNTAKNSVGCQWLAGGGILGPHFSFSWYRGSPIGRERKTEELSRASVEDINIDGHSGFIAIGNEPSLGDSLCEVGIQFSDDFIE--WSVSFSQKPFPLPCDIAKELTRQSIANSK------------ |
| 1K8K Chain:F ((2-167)) | TATLRPYLSAVRATLQAALCLENFSSQ-VVERHNKPEVEVRSSKELLLQP-------------VTISRNEKEKVLIEGSIN-------------SVRVSIAVKQADEIEKILCHKFMRFMMMR------AENFFILRRKPVEGYD---ISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2300 for 1051 contacts (-2.2/contact) +
2D Compatibility (PS) -16081 + (NN) -6345 + (LL) 680
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -31796.0 ( -30.25 by residue)
QMean score : 0.414
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