Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLLSRLRKREPISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTSGESTTAPV
5AB8 Chain:A ((2-117))
------------ISIYDKIGGHEAIEVVVEDFYVRVLADDQLSAFFSGTNMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTAAGVPSETITEILGVIAPLAVDVTS--------
General information:
TITO was launched using:
RESULT:
Template:
5AB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89553 for 800 contacts (-111.9/contact) +
2D Compatibility (PS) -12630 + (NN) -5651 + (LL) 1068
1D Compatibility (HY) -16400 + (ID) 5800
Total energy: -128966.0 ( -161.21 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_5AB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AB8-query.scw
PDB file :
Tito_Scwrl_5AB8.pdb
: