Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTV-TVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP--S-AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPS---------------PPTHFVITLGVRGARYVGAD--GVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
| 2RBC Chain:A ((28-331)) | -----------GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWP-ELALDVLTVARALGKPAILDGDVAPV--ETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAE-G---MQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160489 for 2563 contacts (-62.6/contact) +
2D Compatibility (PS) -32099 + (NN) -18321 + (LL) -140
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -222449.0 ( -86.79 by residue)
QMean score : 0.539
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