Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
1F6T Chain:C ((9-138))
--ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPL-ASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWF---
General information:
TITO was launched using:
RESULT:
Template:
1F6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78571 for 1011 contacts (-77.7/contact) +
2D Compatibility (PS) -14019 + (NN) -5537 + (LL) 212
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -113865.0 ( -112.63 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1F6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F6T-query.scw
PDB file :
Tito_Scwrl_1F6T.pdb
: