Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQHQRPDPMGPGSPRASARRPEPDPMGEPWWSRAVFYQVYPRSFADSNGDGVGDLDGLASRLDHLQQLGVDAIWINPVTVSPMADHGYDVADPRDIDPLFGGMPAFERLVAAAHRQGIKVTMDVVPNHTSSAHPWFQAALADLPGSPARDRYFFRDGRGPDGSLPPNNWESVFGGPAWTRVREPDGNPGQWYLHLFDTEQPDLNWDNPEILDDFEKTLRFWLDRGVDGFRIDVAHGMAKPPGLPDSP-DLGIEVLHHRDDDPRFNHPNVHAIHRDIRTVIDEYPGAVTVGEVWVHDNARWAEYLRPDELHLGFNFRLARTEFDAA--------EIR--DAVANSLAAAALQNAT-----PTWTLANHDVGREVSRYGGGEIGLRR--AKAMAVVMLALPGVVFLYNGQELGLPDVDLPDEVLQDPTWERSGR------------------TERGRDGCRVPIPWSGNIPPFGFSTCPDTWLPMPPEWAALTAEKQRADAGSTLSFFRLALRLRRE-RNEFDGDVDWLAAPDDALI--FRRH-GGGLVCALNAAERPLALPAGEPILASAPLTDATLPPNAAAWLV |
| 4M56 Chain:B ((4-522)) | ------------------------------WWKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWF-AESRKSKDNPYRDYYLWKDPK-PDGS-EPNNWGSIFSGSAWTY----DEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDVIGSISKYTDFPDYET-RSYIVGRYHSNGPRL-HEFIQEMNREVLSHYD----CMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNGKWQIKPFDLIALKKTMTRWQTGLMNVGWNTLYFENHDQPRVISRWGNDR-KLRKECAKAFATVLHGMKGTPFIYQGEEIGMVNSDMPLEMYDDLEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHARTPMQWDAGKHA-GF-TAGDPWIPVNSRYQDINVKESLEDQDSIFFYYQKLIQLRKQYKIMIYGDYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEKALFEA------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130543 for 4084 contacts (-32.0/contact) +
2D Compatibility (PS) -52839 + (NN) -49445 + (LL) 1712
1D Compatibility (HY) -35600 + (ID) 8600
Total energy: -275315.0 ( -67.41 by residue)
QMean score : 0.495
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