Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTTVGFDVAARLGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVKDAKADLHSGAQIM--ADTGLAYYSGDDALNLPWLAMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAVAPLCNAMSRLGGVTLSKAGLRLQG-IDVGDPRLPQVAATPEQIDALAADMRAASVLR
3PUD Chain:B ((6-269))---------------IVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGDVPRGKALIDALNGKMAVYSGDDETAWELMLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNNKIANLHNILFCESNPIPVKWALHEMGLIDTG-IRLP-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3PUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -166671 for 2308 contacts (-72.2/contact) +
2D Compatibility (PS) -28917 + (NN) -19769 + (LL) 3556
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -232301.0 ( -100.65 by residue)
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_3PUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUD-query.scw
PDB file : Tito_Scwrl_3PUD.pdb: