Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
4CNZ Chain:E ((1-112))
MKLVMAIIKPFKLDEVREALTSLGIQGLTVSEVKGFGRQKGQTEIYRGAEYSVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETNTEAL
General information:
TITO was launched using:
RESULT:
Template:
4CNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60099 for 753 contacts (-79.8/contact) +
2D Compatibility (PS) -12109 + (NN) -1224 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -88982.0 ( -118.17 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_4CNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CNZ-query.scw
PDB file :
Tito_Scwrl_4CNZ.pdb
: