Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQA------ELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNL---TARSPL-------VGGEFVDLTDAYSPRLRELARQSDPQ------LAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTN--LAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF |
| 3D1V Chain:A ((27-280)) | -----------------------------VAIICGSG-------LGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163445 for 1938 contacts (-84.3/contact) +
2D Compatibility (PS) -24387 + (NN) -3242 + (LL) 2432
1D Compatibility (HY) -20000 + (ID) 5100
Total energy: -213742.0 ( -110.29 by residue)
QMean score : 0.617
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