Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLA-PRCQKVLEGTGFVISP-DRVMTNAHVVAGSN-------NVTVYAG---DKPF--EATVVSYDPSVDVAILAVPHL--PPPPLVFAAE-PAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
| 4IC5 Chain:A ((42-264)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVNLFQKTSPSVVYIEAIEL-----EGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIP---SPNG-KSISEAIQTDADINSGNAGGPLLDSYGHTIGVNTATF-----VNFAIPIDTVVRTVPYLI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109423 for 1534 contacts (-71.3/contact) +
2D Compatibility (PS) -19414 + (NN) -5023 + (LL) 17372
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -127638.0 ( -83.21 by residue)
QMean score : 0.369
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