Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKQIEFFFDFGSPTTYLAWTQLPRIAAAHGASIAWRPMLLGGVFKATGNHSPIEVPAKGRYTLHDLARYAKRYGVPLAFNPAFPINTLTLMRGAQGYLGGEGFQPYLKAVFEALWVRQQNLG---KPEVVAQVLAEAGFDPDEFLRLVGDEQVKEGLKATTEEAVRR--GVFGAPSFFVGDQLFFG-----QDRLDFVAEVLAG----------------------- |
4NXI Chain:A ((8-207)) | QKSVADFWFDPLCPWCWITSRWILEVAKVRDIEVNFHVMS------------------------LAILNENRREGMARAWGPVRVAIAAEQAHG----------AKVLDPLYTAMGNRIHNQGNHELDEVITQSLADAGL-PAELAKAATSDAYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88344 for 1271 contacts (-69.5/contact) +
2D Compatibility (PS) -17004 + (NN) -3934 + (LL) 860
1D Compatibility (HY) -2800 + (ID) 1650
Total energy: -112872.0 ( -88.81 by residue)
QMean score : 0.516
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