Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR
3NBA Chain:C ((21-176))
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL--
General information:
TITO was launched using:
RESULT:
Template:
3NBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108372 for 1175 contacts (-92.2/contact) +
2D Compatibility (PS) -17161 + (NN) -9257 + (LL) 24
1D Compatibility (HY) -16400 + (ID) 3200
Total energy: -154366.0 ( -131.38 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3NBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NBA-query.scw
PDB file :
Tito_Scwrl_3NBA.pdb
: