Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPN---VVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID |
1XM3 Chain:A ((3-252)) | ---------MLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIF--------LEQLDLSKYTLLPNTAGASTAEEAVRIARLAKAS-GLCDMIKVEVIGCSRSLLPDPVETLKASEQLLE---EGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSPGE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47485 for 1891 contacts (-25.1/contact) +
2D Compatibility (PS) -23708 + (NN) 5485 + (LL) 968
1D Compatibility (HY) 10000 + (ID) 950
Total energy: -55690.0 ( -29.45 by residue)
QMean score : 0.127
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