Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNADWMQRDLNVLWHPCTQMKDHERLPVIPIRRGEGVWLEDFEGKRYIDAVSSWWVNVFGHANPRINQRIKDQVDQ--LEHVILAGFSHQPVIELSERLVKITPPGLDRVFYADSGSAGIEVALKMSYHFWLNSGR-PRKKRFVTLTNSYHGETIAAMSV-GDVALFTETYKSLLLDTIKVPSPDCF------LRPDGMCWEEHSRNMFAHMERTLAEGHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIAPDFLCLSKALTGGYLPMSAVLTSETIYRGFYDDYQTLRAFLHSHTYTGNPLACAAALATLDIFEEDKVIEANRALSTHMARATAHLADH-PHVAEVRQTGMVLAIEMVQDKASRTPYPWQERRGLKVFQHGLERGALLRPLG-SVVYFLPPYVITPEQIDFLAEVASEGIDIATRDAVSVAVSDFHPDHRDPG |
| 1DTY Chain:A ((1-429)) | --MTTDDLAFDERHIWHPYTSMTSPL--PVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMK-SQIDAM-SHVMFGEITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWDAK-GE-ARDRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWD--------ERDMVGFARLMAAHRH----EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISDG--EAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGVVETT-----HPV---N---MAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291595 for 3599 contacts (-81.0/contact) +
2D Compatibility (PS) -44812 + (NN) -14652 + (LL) 1140
1D Compatibility (HY) -30400 + (ID) 8250
Total energy: -388569.0 ( -107.97 by residue)
QMean score : 0.518
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